curl (8.7.1-3) unstable; urgency=medium . [ Carlos Henrique Lima Melara ] * d/p/fix-regression-in-curlinfo.patch: add patch from upstream, thanks to Antonio Terceiro for reporting it (closes: #1069292) . [ Samuel Henrique ] * d/libcurl3t64-gnutls.lintian-overrides: Drop unused override curl (8.7.1-2) unstable; urgency=medium . [ Carlos Henrique Lima Melara ] * d/rules: fix sed substitution regex for curl-config * d/rules: make a call to dpkg-buildflags in curl-config to get CFLAGS (Closes: #1057138) * d/control: suggests dpkg-dev for -dev packages so we get dpkg goodies * d/libcurl4-doc.docs: list each markdown file to be installed * d/make-manpages-reproducible.patch: import from upstream * d/p/fix-regression-on-chunked-post.patch: add new patch from upstream . [ Sergio Durigan Junior ] * d/p/openldap-create-ldap-URLs-correctly-for-IPv6-addresses.patch: (Closes: #1053643) . [ Samuel Henrique ] * d/rules: Run tests in parallel * d/p/test1901...: New patch to confirm regression fix curl (8.7.1-1+exp1) experimental; urgency=medium . * d/rules: Run tests in parallel, using uptream's suggestion of 7 workers per thread: https://daniel.haxx.se/blog/2023/06/08/parallel-curl-tests/ curl (8.7.1-1) unstable; urgency=medium . * New upstream version 8.7.1 - Fix CVE-2024-2004: Usage of disabled protocol - Fix CVE-2024-2398: HTTP/2 push headers memory-leak * d/patches: Drop patches present on this release curl (8.6.0-4) unstable; urgency=medium . [ Carlos Henrique Lima Melara ] * d/libcurl*.links: use substitution variables instead of executable files . [ Simon McVittie ] * d/control: Add a build-profile that disables LDAP support (closes: #1066981) * Temporarily disable LDAP support on 32-bit non-x86 (closes: #1066982) * Temporarily disable build-time tests on 32-bit non-x86 curl (8.6.0-3.2) unstable; urgency=medium . * Non-maintainer upload. * Fix wrong X-Time64-Compat for libcurl4t64. Closes: #1065315. curl (8.6.0-3.1) unstable; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. Closes: #1061992 curl (8.6.0-3.1~exp2) experimental; urgency=medium . * Non-maintainer upload. * Set missing executable bit on debian/libcurl3t64-gnutls.links, lost when round-tripping through diff+patch. curl (8.6.0-3.1~exp1) experimental; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. curl (8.6.0-3) unstable; urgency=medium . * d/p/vtls_revert_receive_max_buffer_add_test_case.patch: New patch to fix tls regression (closes: #1063462) curl (8.6.0-2) unstable; urgency=medium . * d/p/sendf_ignore_response_body_to_head.patch: New upstream patch to fix a compat issue (closes: #1063342) * d/control: Switch from pkg-config to pkgconf curl (8.6.0-1.1) experimental; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. curl (8.6.0-1) unstable; urgency=medium . [ Samuel Henrique ] * New upstream version 8.6.0 - Fix CVE-2024-0853: OCSP verification bypass with TLS session reuse * Drop upstream patches from 8.6.0 * Update approach for installing manpages * d/copyright: Update copyright . [ Carlos Henrique Lima Melara ] * d/control: exclude dependency on gnutls-bin for tests on ppc64el (Closes: #1059952) curl (8.5.0-2+exp1) experimental; urgency=medium . * d/rules: Run tests in parallel geos (3.12.1-3) unstable; urgency=medium . * Add dpkg-dev (>= 1.22.5) to build dependencies for t64 changes. (closes: #1065262) geos (3.12.1-2) unstable; urgency=medium . * Update symbols for other architectures. * Move from experimental to unstable. (closes: #1062100) geos (3.12.1-2~exp1) experimental; urgency=medium . * Improve t64 changes to match team standards. geos (3.12.1-1.1~exp1) experimental; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. lastpass-cli (1.4.0-1) unstable; urgency=medium . * New upstream version 1.4.0 * Refresh patches. libzen (0.4.41-2.1) unstable; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. Closes: #1062741 libzen (0.4.41-2.1~exp1) experimental; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. pdns (4.9.0-2) unstable; urgency=medium . * Apply upstream patch to fix build on big-endian archs pdns (4.9.0-1) unstable; urgency=medium . * New upstream version 4.9.0 * Follow supermaster option rename in default config files pigx-rnaseq (0.1.0-1.1) unstable; urgency=medium . * Non-maintainer upload. * Drop citeproc dependency (no longer required). pigx-rnaseq (0.1.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Set upstream metadata fields: Repository-Browse. * Add M4 files from pigx-common * (Build-)Depends: megadepth pigx-rnaseq (0.0.19+ds-1) unstable; urgency=medium . * Team upload. * Drop broken autoconf m4 files from upstream source and use autoconf-archive instead Closes: #1008368 * Drop files that are not included in upstream source from Files-Excluded * Drop transition for old debug package migration. pigx-rnaseq (0.0.19-2) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * d/contro pigx-rnaseq binary: Added dependency on r-cran-ggpubr * recommending both rna-star and hisat2 . [ Nilesh Patra ] * d/rules: Export HOME to /tmp to fix FTBFS (Closes: #997320) pigx-rnaseq (0.0.19-1) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * New upstream version 0.0.19 * Bumped policy to 4.6.0 * New dependencies - hisat2 - upstream changed default genomic aligner - fastp - fastq file processing - r-cran-gprofiler2 * d/u/metadata: Added ref to SciCrunch RRID:SCR_016476 * overriding dh_fixperms on permissions in /usr/libexec * Added ref to guix . [ Nilesh Patra ] * Remove d/p/salmon_sa.bin2pos.bin.patch: Merged upstream * Pass gunzip and sed paths during configure so it builds reproducible on usrmerge system (Closes: #985144) * Add d/common: The pigx-rnaseq is a submodule needed by this package, But this has no code, and does not look worth it to package. Since its size is very less, it has been added in debian/ dir Changes have also been mentioned in d/copyright * Add B-D on r-cran-ggpubr and r-cran-gprofiler2 pigx-rnaseq (0.0.10+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) pigx-rnaseq (0.0.10+ds-1) unstable; urgency=medium . * Initial release (Closes: #934041) r-bioc-ballgown (2.34.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-ballgown (2.32.0+dfsg-1) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-ballgown (2.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-ballgown (2.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-ballgown (2.26.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Re-add Build-Depends: r-cran-knitr and r-cran-markdown to recreate doc r-bioc-ballgown (2.24.0+dfsg-1) unstable; urgency=medium . * Team Upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * d/control: Remove myself from uploaders, add Andreas instead r-bioc-ballgown (2.22.0+dfsg-2) unstable; urgency=medium . * Source-only Upload. r-bioc-ballgown (2.22.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #986295) r-bioc-biovizbase (1.50.0-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.48.0-1) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure runit will be found * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-biovizbase (1.46.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-biovizbase (1.44.0-1) unstable; urgency=medium . * Drop unused lintian-override * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-biovizbase (1.42.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-biovizbase (1.40.0-2) unstable; urgency=medium . * Disable reprotest * Do not run autodep8 since it needs unpackaged data r-bioc-biovizbase (1.40.0-1) unstable; urgency=medium . * No need to use vignette for autopkgtest since real test is provided * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * lintian-override: No need to link against libc r-bioc-biovizbase (1.38.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * No tab in license text (routine-update) r-bioc-biovizbase (1.36.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-biovizbase (1.34.1-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-biovizbase (1.34.1-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.34.0-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-biovizbase (1.32.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * rename debian/tests/control.autodep8 to debian/tests/control r-bioc-biovizbase (1.30.1-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.30.0-2) unstable; urgency=medium . * Team upload. * Do not call sessionInfo() while building vignettes, it fails on low-memory autopkgtesters. r-bioc-biovizbase (1.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-biovizbase (1.28.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-biovizbase (1.28.1-1) unstable; urgency=medium . * Remove now unneeded Build-Depends r-cran-foreign and r-cran-nnet (see #900974) * New upstream version * dh-update-R to update Build-Depends r-bioc-biovizbase (1.28.0-2) unstable; urgency=medium . * Force r-cran-foreign and r-cran-nnet also in Depends since it is obviously needed - at least the issue re-appears when trying to build r-bioc-gviz and probably also in autopkgtest r-bioc-biovizbase (1.28.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Re-add Build-Depends: r-cran-foreign, r-cran-nnet which was erroneously removed by dh-update-R * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Fix Maintainer and Vcs-fields * Rebuild for R 3.5 transition r-bioc-biovizbase (1.26.0-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.24.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Versioned Build-Depends: r-bioc-ensembldb (>= 1.99.13) * Secure URI in watch file r-bioc-biovizbase (1.22.0-2) unstable; urgency=medium . * Add missing test dependency: r-cran-foreign, r-cran-nnet * debhelper 10 * d/watch: version=4 r-bioc-biovizbase (1.22.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-biovizbase (1.20.0-1) unstable; urgency=medium . * New upstream version * New (Build-)Depends: r-bioc-ensembldb r-bioc-biovizbase (1.18.0-2) unstable; urgency=medium . * Fix test suite * cme fix dpkg-control r-bioc-biovizbase (1.18.0-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.16.0-1) unstable; urgency=medium . * New upstream version r-bioc-biovizbase (1.14.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * Adapted dependencies r-bioc-biovizbase (1.12.3-1) unstable; urgency=medium . * New upstream version * New (build-)dependencies: r-cran-foreign, r-cran-nnet * Add autopkgtest based on vignettes r-bioc-biovizbase (1.12.1-1) unstable; urgency=medium . * New upstream release Closes: #753217 * Add new (Build-)Dependencies: r-bioc-genomicalignments, r-bioc-variantannotation r-bioc-biovizbase (1.10.7-1) unstable; urgency=low . * Initial release (closes: #733527) r-bioc-bsgenome (1.70.2-1) unstable; urgency=medium . * New upstream version * Reorder sequence of d/control fields by cme (routine-update) Set upstream metadata fields: Archive. r-bioc-bsgenome (1.70.1-1) unstable; urgency=medium . * New upstream version * Drop vignette based test r-bioc-bsgenome (1.68.0-1) unstable; urgency=medium . * New upstream version * Rename d/t/run-unit-tests to d/t/vignette to express the type of the test r-bioc-bsgenome (1.66.3-1) unstable; urgency=medium . * New upstream version r-bioc-bsgenome (1.66.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-bsgenome (1.66.1-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-bsgenome (1.64.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-bsgenome (1.62.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-genomeinfodb and r-bioc-xvector. r-bioc-bsgenome (1.60.0-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-biocgenerics, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rtracklayer, r-bioc-s4vectors and r-bioc-xvector. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-bsgenome (1.58.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * No tab in license text (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-bsgenome (1.56.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-bsgenome (1.54.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-bsgenome (1.52.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 r-bioc-bsgenome (1.50.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-bsgenome (1.48.0-3) unstable; urgency=medium . * Rebuild for R 3.5 transition * dh-update-R to update Build-Depends r-bioc-bsgenome (1.48.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-bsgenome (1.48.0-1) unstable; urgency=medium . [ Graham Inggs ] * New Build-Depends: r-bioc-genomicranges (>= 1.29.14) . [ Andreas Tille ] * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-bsgenome (1.46.0-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-bsgenome (1.44.2-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-bsgenome (1.44.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * Standards-Version: 4.1.0 (no changes needed) * Remove unneeded lintian-overrides r-bioc-bsgenome (1.42.0-2) unstable; urgency=medium . * Rebuild against libssl1.0.2 from unstable r-bioc-bsgenome (1.42.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-bsgenome (1.40.0-1) unstable; urgency=medium . * New upstream version r-bioc-bsgenome (1.38.0-2) unstable; urgency=medium . * Fix autopkgtest * cme fix dpkg-control r-bioc-bsgenome (1.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-bsgenome (1.36.3-1) unstable; urgency=medium . * New upstream version * fix watch file * lintian-overrides for package-contains-timestamped-gzip r-bioc-bsgenome (1.36.2-1) unstable; urgency=medium . * New upstream version r-bioc-bsgenome (1.36.1-1) unstable; urgency=medium . * New upstream version r-bioc-bsgenome (1.34.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * Add autopkgtest r-bioc-bsgenome (1.32.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * add new (Build-)Depends: r-bioc-rsamtools (>= 1.15) * package is architecture "all" r-bioc-bsgenome (1.30.0-1) unstable; urgency=low . * New upstream version * Add lintian-overrides r-bioc-bsgenome (1.28.0-1) unstable; urgency=low . * Initial release (closes: #728277) r-bioc-bsseq (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-bsseq (1.36.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-bsseq (1.34.0+dfsg-4) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-bsseq (1.34.0+dfsg-3) unstable; urgency=medium . * Test-Depends as per Suggests * Standards-Version: 4.6.2 (routine-update) r-bioc-bsseq (1.34.0+dfsg-2) unstable; urgency=medium . * Packaging update * Reorder sequence of d/control fields by cme (routine-update) * Reduce piuparts noise in transitions (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. * Drop now unneeded lintian-overrides r-bioc-bsseq (1.34.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1024563) r-bioc-cner (1.38.0+dfsg-2) unstable; urgency=medium . * Relax tolerance of one more test to fix test issues on armel, armhf and ppc64el r-bioc-cner (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-cner (1.36.0+dfsg-3) unstable; urgency=medium . * Really lower precision for some architectures in autopkgtest r-bioc-cner (1.36.0+dfsg-2) unstable; urgency=medium . * Drop test for armel, armhf and ppc64el * Lower precision to avoid failure on armel, armhf and ppc64el r-bioc-cner (1.36.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Add debian/tests/autopkgtest-r-pkg.conf r-bioc-cner (1.34.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-cner (1.32.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-cner (1.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-cner (1.28.0+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on dh-r, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicalignments, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rtracklayer, r-bioc-s4vectors, r-bioc-xvector, r-cran-ggplot2 and r-cran-reshape2. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-cner (1.26.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-cner (1.24.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-cner (1.22.0+dfsg-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-cner (1.22.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-cner (1.20.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * rename debian/tests/control.autodep8 to debian/tests/control * Deactivated autopkgtest since the needed data packages are not available r-bioc-cner (1.18.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends r-bioc-cner (1.16.1+dfsg-1) unstable; urgency=medium . * Initial release (closes: #900412) r-bioc-cummerbund (2.44.0-1) unstable; urgency=medium . * New upstream version * Add d/t/autopkgtest-pkg-r.conf r-bioc-cummerbund (2.42.0-2) unstable; urgency=medium . * Drop debian/gbp.conf * Upstream does not provide any test * No need to install vignettes as examples r-bioc-cummerbund (2.42.0-1) unstable; urgency=medium . * Disable reprotest * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-cummerbund (2.40.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-cummerbund (2.38.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-cummerbund (2.36.0-1) unstable; urgency=medium . * Team upload. * [9f8382e] New upstream version 2.36.0 r-bioc-cummerbund (2.34.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-cummerbund (2.32.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-cummerbund (2.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-cummerbund (2.28.0-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g * Remove obsolete fields Name from debian/upstream/metadata. r-bioc-cummerbund (2.26.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-bioc-cummerbund (2.24.0-2) unstable; urgency=medium . * Team upload * Do not call sessionInfo() while building vignettes, it fails on low-memory autopkgtesters r-bioc-cummerbund (2.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-cummerbund (2.22.0-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * New upstream version * debhelper 11 * Maintainer: Debian R Packages Maintainers * Point Vcs fields to salsa.debian.org * dh-update-R to update Build-Depends r-bioc-cummerbund (2.20.0-1) unstable; urgency=medium . * New upstream version * Add Registry entry r-bioc-cummerbund (2.18.0-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file * Standards-Version: 4.1.1 * debhelper 10 * Add debian/README.source to document binary data files r-bioc-cummerbund (2.16.0-3) unstable; urgency=medium . * Team upload. * Rebuild for r-api-3.4 transition. r-bioc-cummerbund (2.16.0-2) unstable; urgency=medium . * Build-Depends: r-cran-foreign, r-cran-nnet Closes: #842914 r-bioc-cummerbund (2.16.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-cummerbund (2.14.0-2) unstable; urgency=medium . * Fixed autopkgtest (thanks to Gordon Ball) r-bioc-cummerbund (2.14.0-1) unstable; urgency=medium . * New upstream version r-bioc-cummerbund (2.12.1-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * (hopefully) fix autopkgtest r-bioc-cummerbund (2.12.0-1) unstable; urgency=medium . * New upstream version Closes: #803567 r-bioc-cummerbund (2.10.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * Update dependencies * Update copyright info * Add autopkgtest based on vignettes r-bioc-cummerbund (2.6.1-1) unstable; urgency=low . * New upstream version Closes: #753193 * Drop Carlos Borroto from Uploaders at his request * Moved debian/upstream to debian/upstream/metadata r-bioc-cummerbund (2.4.1-1) unstable; urgency=low . * New upstream version * debian/rules: Remove useless creation of ${R-Depends} * debian/control: Versioned Build-Depends: r-base-dev (>= 3.0) * debian/README.test: add hint how to test the package r-bioc-cummerbund (1.2.0-2) unstable; urgency=low . [ Charles Plessy ] f419ef1 Normalised VCS URLs following Lintian's standard. d5c4363 Removed obsolete DM-Upload-Allowed field. 6982298 Normalised Debian copyright file with 'cme fix dpkg-copyright'. 38bee3c Normalised debian/control with 'cme fix dpkg-copyright'. 9587f21 Use Debhelper 9. 9560362 Conforms with Policy 3.9.4. . [ Andreas Tille ] * Upload to unstable after verifying that predepends are properly build r-bioc-cummerbund (1.2.0-1) unstable; urgency=low * New upstream release * debian/watch: Track stable releases instead of development releases * debian/upstream: Reference as given in citation("cummeRbund") * debian/control: Standards-Version: 3.9.3 (no changes needed) * debian/rules: Enable hardening r-bioc-cummerbund (1.1.3-1) unstable; urgency=low * Initial release (Closes: #657997) r-bioc-dada2 (1.30.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-dada2 (1.28.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Set upstream metadata fields: Repository-Browse. * Lintian-overrides for custom-library-search-path r-bioc-dada2 (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) * Remove unused license definitions for GPL-2.0+. r-bioc-dada2 (1.24.0+dfsg-2) unstable; urgency=medium . * Team Upload. * Re-build against rcpp r-bioc-dada2 (1.24.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-dada2 (1.22.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-dada2 (1.20.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * d/u/metadata: - Set upstream metadata fields: Bug-Submit. - Added references to registries r-bioc-dada2 (1.18.0+dfsg-1) unstable; urgency=medium . * Team upload. * d/copyright: pval.c was removed from source r-bioc-dada2 (1.16.0+dfsg-2) unstable; urgency=medium . * Team upload. * Versioned Build-Depends: r-cran-rcppparallel (>= 5.0.2+dfsg-3) Closes: #971115 * Architecture: any-amd64 Closes: #959656 * debhelper-compat 13 (routine-update) r-bioc-dada2 (1.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Rules-Requires-Root: no (routine-update) r-bioc-dada2 (1.14.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 r-bioc-dada2 (1.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-dada2 (1.12.1+dfsg-1) unstable; urgency=medium . * Initial release (closes: #940061) Second upload fixing the copyright - thanks go to ftpadmin Thorsten for spotting this. r-bioc-degnorm (1.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Add d/t/autopkgtest-pkg-r.conf r-bioc-degnorm (1.10.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-degnorm (1.8.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-degnorm (1.8.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-degnorm (1.8.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-degnorm (1.6.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-degnorm (1.6.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-degnorm (1.4.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-degnorm (1.2.0+ds-2) unstable; urgency=medium . * Team upload. * Source-only upload r-bioc-degnorm (1.2.0+ds-1) unstable; urgency=medium . * Initial release (closes: #992630) r-bioc-demixt (1.18.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version Closes: #1058278 * Remove vignette based test r-bioc-demixt (1.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Rename d/t/run-unit-test to d/t/vignette r-bioc-demixt (1.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * Repack upstream source to exclude HTML doc with compressed JS * Build-Depends: r-bioc-dss Closes: #1024597 * Add lintian-overrides (see lintian bug #1017966) r-bioc-demixt (1.14.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-demixt (1.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Remove autogenerated HTML docs since it is including compressed JS r-bioc-demixt (1.10.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.10.0 * d/control: Run dh-update-R r-bioc-demixt (1.8.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Submit. r-bioc-demixt (1.6.0-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-demixt (1.4.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-demixt (1.2.5-3) unstable; urgency=medium . * Team Upload. . [ Steffen Möller ] * Fixed the fixme . [ Nilesh Patra ] * Modify tests to weave Rmd * Fix permissions of *.Rmd files * Update upstream/metadata r-bioc-demixt (1.2.5-2) unstable; urgency=medium . * Team upload. * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. r-bioc-demixt (1.2.5-1) unstable; urgency=medium . * Team upload. * Initial release (closes: #951575) r-bioc-dexseq (1.48.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-dexseq (1.46.0+dfsg-1) unstable; urgency=medium . * Team upload. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Skip another test requiring pasilla r-bioc-dexseq (1.44.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-dexseq (1.42.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-dexseq (1.40.0+dfsg-1) unstable; urgency=medium . * Team upload. * Disable reprotest * dh-update-R to update Build-Depends (routine-update) r-bioc-dexseq (1.38.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-dexseq (1.36.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-dexseq (1.34.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-dexseq (1.34.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-dexseq (1.32.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #958967) r-bioc-dss (2.50.1+dfsg-1) unstable; urgency=medium . * New upstream version Closes: #1058613 * Add autopkgtest-pkg-r.conf r-bioc-dss (2.48.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-dss (2.46.0+dfsg-2) unstable; urgency=medium . * Drop now unneeded lintian-overrides * Reorder sequence of d/control fields by cme (routine-update) * Reduce piuparts noise in transitions (routine-update) * Trim trailing whitespace. r-bioc-dss (2.46.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1024565) r-bioc-edaseq (2.36.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-edaseq (2.34.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-edaseq (2.32.0+dfsg-2) unstable; urgency=medium . * Disable reprotest * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-edaseq (2.32.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-edaseq (2.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-edaseq (2.28.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-edaseq (2.26.1+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-edaseq (2.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-edaseq (2.22.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Trim trailing whitespace. r-bioc-edaseq (2.20.0+dfsg-2) unstable; urgency=medium . * Source only upload. r-bioc-edaseq (2.20.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #955735) r-bioc-ensembldb (2.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.24.1+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-ensembldb (2.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-ensembldb (2.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-ensembldb (2.20.2+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-ensembldb (2.20.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-ensembldb (2.18.4+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-ensembldb (2.18.3+dfsg-1) unstable; urgency=medium . * New upstream version * Add missing build dependency on dh addon. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Skip autopkgtest * Disable reprotest r-bioc-ensembldb (2.18.2+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-ensembldb (2.16.4+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-annotationdbi, r-bioc-biocgenerics, r-bioc-biostrings, r-bioc-genomicfeatures, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors and r-cran-rsqlite. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-ensembldb (2.14.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * No tab in license text (routine-update) * Set upstream metadata fields: Bug-Submit, Repository. r-bioc-ensembldb (2.12.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.10.2+dfsg-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-ensembldb (2.10.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.10.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * debian/copyright: Use spaces rather than tabs in continuation lines. * Set upstream metadata fields: Bug-Database, Repository. r-bioc-ensembldb (2.8.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-ensembldb (2.8.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.0 r-bioc-ensembldb (2.6.5+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.6.4+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/copyright r-bioc-ensembldb (2.6.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.6.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ensembldb (2.6.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-ensembldb (2.4.1+dfsg-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * Remove autogenerated HTML docs since it is including compressed JS r-bioc-ensembldb (2.4.1-1) unstable; urgency=medium . * New upstream version r-bioc-ensembldb (2.4.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-ensembldb (2.4.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-ensembldb (2.2.2-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * debhelper 11 r-bioc-ensembldb (2.2.0-2) unstable; urgency=medium . * Upstream switched from unittests to testthat but now even testthat.R importet dataset EnsDb.Hsapiens.v75 which is not packaged. So switch back to basic `Testsuite: autopkgtest-pkg-r` for autopkgtest Closes: #882355 r-bioc-ensembldb (2.2.0-1) unstable; urgency=medium . * New upstream version * New versioned Build-Depends: r-bioc-genomicfeatures (>= 1.29.10), r-bioc-annotationfilter (>= 1.1.9) r-bioc-ensembldb (2.0.4-1) unstable; urgency=medium . * New upstream version * No need to Build-Depend: r-base-dev * New Build-Depends: r-bioc-annotationfilter, r-bioc-protgenerics * Add debian/README.source to document binary data files * Add shebang line to perl script * Script makeEnsemblDbPackage.R not distributed any more thus remove it from d/copyright * Secure URI in watch file r-bioc-ensembldb (1.6.2-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-ensembldb (1.6.2-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-ensembldb (1.6.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage * Exclude tests requiring EnsDb.Hsapiens.v75 from unit tests r-bioc-ensembldb (1.4.6-1) unstable; urgency=low . * Initial release (closes: #825906) r-bioc-genelendatabase (1.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-genelendatabase (1.36.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-genelendatabase (1.34.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-genelendatabase (1.32.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genelendatabase (1.30.0-1) unstable; urgency=medium . * New upstream version r-bioc-genelendatabase (1.28.0-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-genelendatabase (1.26.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-genelendatabase (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genelendatabase (1.22.0-2) unstable; urgency=medium . * Trim trailing whitespace. r-bioc-genelendatabase (1.22.0-1) unstable; urgency=medium . * Initial release (closes: #954989) r-bioc-genomicalignments (1.38.2-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.38.1-1) unstable; urgency=medium . * New upstream version Set upstream metadata fields: Archive. r-bioc-genomicalignments (1.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.36.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicalignments (1.34.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-genomicalignments (1.32.1-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.32.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genomicalignments (1.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.30.0 * d/control: Run dh-update-R r-bioc-genomicalignments (1.28.0-1) unstable; urgency=medium . [ Steffen Moeller ] * New upstream version * d/u/metadata: yamllint and completion * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Disable reprotest r-bioc-genomicalignments (1.26.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-genomicalignments (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-genomicalignments (1.22.1-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.22.0-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-genomicalignments (1.20.1-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-bioc-genomicalignments (1.18.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.3.0 r-bioc-genomicalignments (1.18.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-genomicalignments (1.16.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-genomicalignments (1.16.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Standards-Version: 4.1.4 r-bioc-genomicalignments (1.14.2-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.14.1-1) unstable; urgency=medium . * Team upload. . [ Graham Inggs ] * New Build-Depends: r-bioc-genomicranges (>= 1.29.14) . [ Dylan Aïssi ] * New upstream version. * Debhelper 11. * Standards-Version: 4.1.3. * Add ref to registries. r-bioc-genomicalignments (1.14.0-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-genomicalignments (1.12.2-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-genomicalignments (1.12.2-1) unstable; urgency=medium . * New upstream version * debhelper 10 * Standards-Version: 4.1.0 (no changes needed) r-bioc-genomicalignments (1.12.1-1) unstable; urgency=medium . * Team upload * New upstream version * Update Build-Depends: r-bioc-summarizedexperiment (>=1.5.3) r-bioc-genomicalignments (1.10.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-genomicalignments (1.8.0-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.6.3-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * According to unit tests: Depends: r-bioc-genomicranges (>= 1.22.4) r-bioc-genomicalignments (1.6.1-1) unstable; urgency=medium . * New upstream version Closes: #803479 * Add new (Build-)Depends: r-bioc-summarizedexperiment r-bioc-genomicalignments (1.4.1-1) unstable; urgency=medium . * New upstream version * Disable patch * Citation * New versioned dependency r-bioc-rsamtools (>= 1.20.4) r-bioc-genomicalignments (1.2.0-1) experimental; urgency=medium . * New upstrem version * cme fix dpkg-control * Adapt to new dependencies r-bioc-genomicalignments (1.0.6-1) unstable; urgency=medium . * New upstream version r-bioc-genomicalignments (1.0.2-1) unstable; urgency=medium . * Initial release (closes: #754154) r-bioc-genomicfeatures (1.54.3+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) Set upstream metadata fields: Archive. r-bioc-genomicfeatures (1.54.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfeatures (1.52.2+dfsg-1) unstable; urgency=medium . * Team Upload. * New upstream version r-bioc-genomicfeatures (1.52.1+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicfeatures (1.50.4+dfsg-1) unstable; urgency=medium . * New upstream version * Trim trailing whitespace. r-bioc-genomicfeatures (1.50.3+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Use Debian packaged libjs-mathjax r-bioc-genomicfeatures (1.50.2+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-genomicfeatures (1.48.4+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.48.3+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.48.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genomicfeatures (1.48.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.48.0+dfsg * Exclude and regenerate html doc r-bioc-genomicfeatures (1.46.5+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.46.4+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.46.3+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Skip autopkgtest and mark it superficial * Disable reprotest r-bioc-genomicfeatures (1.46.1+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-genomeinfodb. r-bioc-genomicfeatures (1.44.2+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-annotationdbi, r-bioc-biostrings, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-xvector and r-cran-rsqlite. . [ Nilesh Patra ] * Add versioned scheme on several B-D, as per DESCRIPTION file, add B-D on r-bioc-biocio r-bioc-genomicfeatures (1.42.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Remove trailing whitespace in debian/rules (routine-update) r-bioc-genomicfeatures (1.42.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.40.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-genomicfeatures (1.40.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfeatures (1.38.2+dfsg-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-genomicfeatures (1.38.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfeatures (1.38.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) r-bioc-genomicfeatures (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-genomicfeatures (1.36.4+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.0 * Autopkgtest is deactivated anyway so there is no need to patch the tests * Remove trailing whitespace in debian/copyright r-bioc-genomicfeatures (1.34.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfeatures (1.34.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-genomicfeatures (1.34.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfeatures (1.32.3+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-genomicfeatures (1.32.2+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.32.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.0 r-bioc-genomicfeatures (1.32.0+dfsg-3) unstable; urgency=medium . * Rebuild for R 3.5 transition r-bioc-genomicfeatures (1.32.0+dfsg-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-genomicfeatures (1.32.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-genomicfeatures (1.30.3+dfsg-1) unstable; urgency=medium . [ Graham Inggs ] * New Build-Depends: r-bioc-genomicranges (>= 1.29.14) . [ Andreas Tille ] * New upstream version * Standards-Version: 4.1.3 * debhelper 11 r-bioc-genomicfeatures (1.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file * New Build-Depends: r-cran-rmysql r-bioc-genomicfeatures (1.28.5+dfsg-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Testsuite: autopkgtest-pkg-r r-bioc-genomicfeatures (1.28.4+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.0 (no changes needed) * Versioned Build-Depends: r-cran-rsqlite (>= 2.0) * Remove external Rda data files r-bioc-genomicfeatures (1.28.0-1) unstable; urgency=medium . * Team upload * New upstream version r-bioc-genomicfeatures (1.26.2-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-genomicfeatures (1.26.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-genomicfeatures (1.24.1-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.24.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-genomicfeatures (1.22.4-1) unstable; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.20.5-1) unstable; urgency=medium . * New upstream version * Fixed watch file r-bioc-genomicfeatures (1.20.1-1) unstable; urgency=medium . * New upstream version * drop autotest since it needs external data r-bioc-genomicfeatures (1.18.1-1) experimental; urgency=medium . * New upstream version r-bioc-genomicfeatures (1.18.0-1) experimental; urgency=medium . * New upstream version * Updated versioned dependencies r-bioc-genomicfeatures (1.16.3-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-genomicfeatures (1.16.2-1) unstable; urgency=medium . [ Martin Pitt ] * debian/tests/control: Add missing r-cran-runit test dependency, and allow stderr output. . [ Andreas Tille ] * New upstream version * (Build-)Depends: r-bioc-genomeinfodb * Add citation * Make test independent from TxDb.Hsapiens.UCSC.hg19.knownGene Closes: #735548 r-bioc-genomicfeatures (1.14.2-1) unstable; urgency=low . * Initial release (closes: #733329) r-bioc-genomicfiles (1.38.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor r-bioc-genomicfiles (1.36.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Remove autogenerated HTML docs since it is including compressed JS r-bioc-genomicfiles (1.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-genomicfiles (1.32.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genomicfiles (1.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicfiles (1.28.0-2) unstable; urgency=medium . * Team upload. * Provide autopkgtest-pkg-r.conf to make sure RUnit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Disable reprotest r-bioc-genomicfiles (1.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-genomicfiles (1.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-genomicfiles (1.24.0-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Trim trailing whitespace. r-bioc-genomicfiles (1.24.0-1) unstable; urgency=medium . * Initial release (closes: #969061) r-bioc-ggbio (1.50.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ggbio (1.48.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Replace d/t/control by d/t/autopkgtest-r-pkg r-bioc-ggbio (1.46.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-ggbio (1.44.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-ggbio (1.44.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-ggbio (1.42.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.42.0 r-bioc-ggbio (1.40.0-2) unstable; urgency=medium . * Team upload. * Add test-dep on r-bioc-organismdbi r-bioc-ggbio (1.40.0-1) unstable; urgency=medium . * Initial release (closes: #992709) r-bioc-goseq (1.54.0-1) unstable; urgency=medium . * New upstream version * Add d/t/autopkgtest-pkg-r.conf r-bioc-goseq (1.52.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-goseq (1.50.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-goseq (1.48.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-goseq (1.46.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version r-bioc-goseq (1.44.0-1) unstable; urgency=medium . [ Steffen Moeller ] * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * Added d/u/metadata . [ Andreas Tille ] * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-goseq (1.42.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-goseq (1.40.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Trim trailing whitespace. r-bioc-goseq (1.38.0-2) unstable; urgency=medium . * Source only upload r-bioc-goseq (1.38.0-1) unstable; urgency=medium . * Initial release (closes: #955138) r-bioc-grohmm (1.36.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Add d/t/autopkgtest-pkg-r.conf r-bioc-grohmm (1.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-grohmm (1.32.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-grohmm (1.30.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Remove trailing whitespace in debian/changelog (routine-update) * Drop S.h patch now applied upstream r-bioc-grohmm (1.29.1-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) . [ Nilesh Patra ] * Remove S.h includes r-bioc-grohmm (1.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-grohmm (1.26.0-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-genomicalignments, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rtracklayer and r-bioc-s4vectors. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-grohmm (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-grohmm (1.22.0-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-grohmm (1.22.0-1) unstable; urgency=medium . * Initial release (closes: #962661) r-bioc-gviz (1.46.1+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.44.2+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.44.1+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.44.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-gviz (1.42.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-gviz (1.42.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.40.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-gviz (1.38.3+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-gviz (1.38.2+dfsg-2) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-gviz (1.38.2+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Add missing build dependency on dh addon. r-bioc-gviz (1.38.1+dfsg-1) unstable; urgency=medium . * New upstream version * Add missing build dependency on dh addon. r-bioc-gviz (1.38.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.38.0+dfsg * d/control: Run dh-update-R r-bioc-gviz (1.36.2+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-gviz (1.34.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-gviz (1.32.0+dfsg-2) unstable; urgency=medium . * Team upload. * Add patch to skip tests requiring package not available in Debian. (Closes: #961592) r-bioc-gviz (1.32.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-gviz (1.30.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-gviz (1.30.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) * Set upstream metadata fields: Bug-Submit, Repository. r-bioc-gviz (1.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.1 * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-gviz (1.28.3+dfsg-1) unstable; urgency=medium . * New upstream version * Set upstream metadata fields: Bug-Database, Repository. r-bioc-gviz (1.28.1+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 r-bioc-gviz (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove autogenerated HTML docs since it is including compressed JS r-bioc-gviz (1.26.4-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-gviz (1.26.3-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-gviz (1.26.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-gviz (1.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright r-bioc-gviz (1.24.0-1) unstable; urgency=medium . * New upstream version * Maintainer: Debian R Packages Maintainers * Point Vcs fields to salsa.debian.org * dh-update-R to update Build-Depends r-bioc-gviz (1.22.3-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.3 * debhelper 11 r-bioc-gviz (1.22.0-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file * Standards-Version: 4.1.1 * Testsuite: autopkgtest-pkg-r r-bioc-gviz (1.20.0-2) unstable; urgency=medium . * Team upload. * Rebuild for r-api-3.4 transition. r-bioc-gviz (1.20.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.0 (no changes needed) r-bioc-gviz (1.18.1-2) unstable; urgency=medium . * block network access during package build Closes: #862039 r-bioc-gviz (1.18.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-gviz (1.18.0-2) unstable; urgency=medium . * Build-Depends: r-cran-foreign, r-cran-nnet Closes: #842915 r-bioc-gviz (1.18.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-gviz (1.16.4-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.16.1-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-gviz (1.14.0-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.12.1-1) unstable; urgency=medium . * New upstream version r-bioc-gviz (1.10.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-gviz (1.8.4-1) unstable; urgency=medium . * New upstream version * Add better advise how the package can be tested r-bioc-gviz (1.8.3-1) unstable; urgency=medium . * New upstream version * Moved debian/upstream to debian/upstream/metadata * (Build-)Depends: r-bioc-genomicalignments, r-bioc-genomicfeatures (>= 1.16.2-1), r-cran-matrixstats r-bioc-gviz (1.6.0-1) unstable; urgency=low . * Initial release (closes: #733720) r-bioc-ioniser (2.26.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-ioniser (2.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Replace d/t/control by d/t/autopkgtest-r-pkg.conf r-bioc-ioniser (2.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-ioniser (2.20.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-ioniser (2.18.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Add marker to not delete the needed Build-Depends r-bioc-ioniser (2.16.0+dfsg-2) unstable; urgency=medium . * Team Upload. * d/t/autopkgtest-pkg-r.hook: hook to remove tests depending on miniondatasummary since this is not packaged (Closes: #995199) r-bioc-ioniser (2.16.0+dfsg-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) . [ Nilesh Patra ] * d/control: Remove myself from uploaders, add Andreas instead * Re-add needed B-D: Reverts routine-update: dh-update-R to update Build-Depends (3) r-bioc-ioniser (2.14.0+dfsg-2) unstable; urgency=medium . * Fix copyright year r-bioc-ioniser (2.14.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #986170) r-bioc-isoformswitchanalyzer (2.2.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-isoformswitchanalyzer (2.0.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Add autopkgtest-pkg-r.conf r-bioc-isoformswitchanalyzer (1.20.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. r-bioc-isoformswitchanalyzer (1.18.0+ds-1) unstable; urgency=medium . * Team Upload. * New upstream version 1.18.0+ds r-bioc-isoformswitchanalyzer (1.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version 1.16.0+ds * d/control: Run dh-update-R * Add B-D on r-cran-drimseq (Closes: #999632) r-bioc-isoformswitchanalyzer (1.14.0+ds-1) unstable; urgency=medium . * Initial release (closes: #995255) r-bioc-mutationalpatterns (3.12.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-mutationalpatterns (3.10.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-mutationalpatterns (3.8.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-mutationalpatterns (3.8.0+dfsg-2) unstable; urgency=medium . * Fix test suite issue to work with upgraded stringr r-bioc-mutationalpatterns (3.8.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-mutationalpatterns (3.6.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-mutationalpatterns (3.4.1+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-mutationalpatterns (3.4.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-mutationalpatterns (3.2.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) r-bioc-mutationalpatterns (3.0.1+dfsg-2) unstable; urgency=medium . * Add hook to deal with unavailable BioC packages in test Closes: #983027 r-bioc-mutationalpatterns (3.0.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor r-bioc-mutationalpatterns (3.0.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Delete patch that does not apply. Autopkgtest is deactivated anyway. * Remove autogenerated HTML docs since it is including compressed JS r-bioc-mutationalpatterns (2.0.0-2) unstable; urgency=medium . * Team upload. * Add patch to skip tests requiring packages not in Debian (Closes: #961572) r-bioc-mutationalpatterns (2.0.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-mutationalpatterns (1.12.0-2) unstable; urgency=medium . * Trim trailing whitespace. r-bioc-mutationalpatterns (1.12.0-1) unstable; urgency=medium . * Initial release (closes: #955712) r-bioc-organismdbi (1.44.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-organismdbi (1.42.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Remove autogenerated HTML docs since it is including compressed JS * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-organismdbi (1.40.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-organismdbi (1.38.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-organismdbi (1.38.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-organismdbi (1.36.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Trim trailing whitespace. r-bioc-organismdbi (1.34.0-2) unstable; urgency=medium . * Team upload. * Avoid running tests since homo.sapiens is not packaged r-bioc-organismdbi (1.34.0-1) unstable; urgency=medium . * Initial release (closes: #991825) r-bioc-purecn (2.8.1+dfsg-1) unstable; urgency=medium . * New upstream version Set upstream metadata fields: Archive. r-bioc-purecn (2.6.4+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-purecn (2.4.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-purecn (2.2.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-purecn (2.0.2+dfsg-2) unstable; urgency=medium . * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-purecn (2.0.2+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-purecn (2.0.1+dfsg-1) unstable; urgency=medium . * Allow failure for piuparts * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-purecn (1.22.2+dfsg-1) unstable; urgency=medium . * Prepare for proper autopkgtest-pkg-r usage * Fix permissions * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-genomicranges, r-bioc-iranges and r-bioc-variantannotation. r-bioc-purecn (1.20.0+dfsg-3) unstable; urgency=medium . * Deactivate Testsuite: autopkgtest-pkg-r Closes: #981820 r-bioc-purecn (1.20.0+dfsg-2) unstable; urgency=medium . [ Steffen Moeller ] * Smallish lintian quirks I only saw after upload. Sorry. . [ Andreas Tille ] * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Exclude test needing not packaged data set TxDb.Hsapiens.UCSC.hg19.knownGene * Exclude more tests that are failing due to missing data r-bioc-purecn (1.20.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #976789) r-bioc-rgsepd (1.34.0-1) unstable; urgency=medium . * New upstream version * Add d/t/autopkgtest-pkg-r.conf r-bioc-rgsepd (1.32.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-rgsepd (1.30.0-1) unstable; urgency=medium . * New upstream version r-bioc-rgsepd (1.28.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-rgsepd (1.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.26.0 r-bioc-rgsepd (1.24.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-rgsepd (1.22.0-1) unstable; urgency=medium . * New upstream version r-bioc-rgsepd (1.20.2-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-rgsepd (1.20.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Trim trailing whitespace. r-bioc-rgsepd (1.18.0-2) unstable; urgency=medium . * Add missing copyright entry r-bioc-rgsepd (1.18.0-1) unstable; urgency=medium . * Initial release (closes: #955164) r-bioc-rhtslib (2.4.1+dfsg-3) unstable; urgency=medium . * Build-Depends: architecture-is-64-bit and revert to Architecture: any since this is the more elegant way to exclude 32bit (thanks for the hint to Paul Gevers) r-bioc-rhtslib (2.4.1+dfsg-2) unstable; urgency=medium . * Restrict architectures to 64bit to avoid time_t transition Closes: #1063275 r-bioc-rhtslib (2.4.1+dfsg-1) unstable; urgency=medium . * New upstream version Set upstream metadata fields: Archive. r-bioc-rhtslib (2.4.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rhtslib (2.2.0+dfsg-2) unstable; urgency=medium . * Fix clean target Closes: #1047493 * Fix copyright r-bioc-rhtslib (2.2.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-rhtslib (2.0.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-rhtslib (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) * Trim trailing whitespace. r-bioc-rhtslib (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.26.0+dfsg r-bioc-rhtslib (1.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-rhtslib (1.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Repository. r-bioc-rhtslib (1.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-rhtslib (1.18.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 r-bioc-rhtslib (1.18.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Build-Depends: + libcurl4-openssl-dev r-bioc-rhtslib (1.16.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-rhtslib (1.16.2+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.0 * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Repository. * Test-Depends: r-cran-rmarkdown, pandoc-citeproc * Deactivate autopkgtest since it needs not yet packaged r-bioc-biocstyle r-bioc-rhtslib (1.16.1+dfsg-1) unstable; urgency=medium . * Initial release (closes: #931394) r-bioc-rsamtools (2.18.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-rsamtools (2.16.0+dfsg-2) unstable; urgency=medium . * Exclude another test trying to write to /usr/lib r-bioc-rsamtools (2.16.0+dfsg-1) unstable; urgency=medium . * Do not try to write data file on /usr/lib * Remove autogenerated HTML docs since it is including compressed JS r-bioc-rsamtools (2.16.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-rsamtools (2.14.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-rsamtools (2.12.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-rsamtools (2.10.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-rsamtools (2.8.0-1) unstable; urgency=medium . [ Steffen Moeller ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * d/u/metadata: Added references to registries . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-rsamtools (2.6.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * debian/copyright: use spaces rather than tabs to start continuation lines. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-rsamtools (2.4.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Testsuite: autopkgtest-pkg-r (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-rsamtools (2.2.3-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rsamtools (2.2.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) r-bioc-rsamtools (2.2.1-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends * Add libcurl4-openssl-dev to Build-Depends r-bioc-rsamtools (2.0.3-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends r-bioc-rsamtools (2.0.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.0 * dh-update-R to update Build-Depends r-bioc-rsamtools (2.0.1-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.0 r-bioc-rsamtools (2.0.0-1) unstable; urgency=medium . * New upstream version * New Build-Depends: r-bioc-rhtslib r-bioc-rsamtools (1.34.1-1) unstable; urgency=medium . [ Dylan Aïssi ] * Remove patch and use r-bioc-zlibbioc. . [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/copyright r-bioc-rsamtools (1.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rsamtools (1.32.3-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-rsamtools (1.32.2-1) unstable; urgency=medium . * New upstream version r-bioc-rsamtools (1.32.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-rsamtools (1.32.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Secure URI in watch file * Do not try to use libbam-dev which is a way more recent version but incompatible version than what is shipped inside r-bioc-rsamtools source download r-bioc-rsamtools (1.30.0-1) unstable; urgency=medium . * New upstream version r-bioc-rsamtools (1.28.0-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-rsamtools (1.28.0-1) unstable; urgency=medium . * Team upload * New upstream version * Drop unused debian/patches/use-debian-packaged-libs.patch r-bioc-rsamtools (1.26.1-2) unstable; urgency=medium . * Remove test requiring network connection * debhelper 10 * d/watch: version=4 * drop unused lintian override r-bioc-rsamtools (1.26.1-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-rsamtools (1.24.0-1) unstable; urgency=medium . * New upstream version * Fix versioned Dependencies r-bioc-rsamtools (1.22.0-2) unstable; urgency=medium . * Fix autopkgtest by adding r-cran-runit * cme fix dpkg-control r-bioc-rsamtools (1.22.0-1) unstable; urgency=medium . * New upstream version * (Build-)Depends: r-bioc-biocparallel * Add lintian-override for false positive r-bioc-rsamtools (1.20.4-1) unstable; urgency=medium . * New upstream version r-bioc-rsamtools (1.20.1-1) unstable; urgency=medium . * New upstream version * Activate autopkgtest r-bioc-rsamtools (1.18.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-rsamtools (1.16.1-2) unstable; urgency=medium . * debian/README.test: Fix advise for testing the package * debian/control: Recommends: r-bioc-shortread * Rebuild against recent BioC tools Closes: #753233 r-bioc-rsamtools (1.16.1-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * debian/README.test: More verbose information how to run the test suite r-bioc-rsamtools (1.14.2-1) unstable; urgency=low . * New upstream version (adapted patch) Closes: #730984 * Build-Depends: r-bioc-xvector r-bioc-rsamtools (1.12.4-1) unstable; urgency=low . * Initial release (closes: #728285) r-bioc-rtracklayer (1.62.0-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.60.1-1) unstable; urgency=medium . * New upstream version * Patch harder to tell that BSgenome.Hsapiens.UCSC.hg19 is not available r-bioc-rtracklayer (1.60.0-1) unstable; urgency=medium . [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Try running upstream test suite as autopkgtest r-bioc-rtracklayer (1.58.0-1) unstable; urgency=medium . * Update link to alioth list * Disable reprotest * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-rtracklayer (1.56.1-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.56.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-rtracklayer (1.54.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-rtracklayer (1.52.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Build-Depends: r-bioc-biocio, r-cran-restfulr * Not testing since non-packaged data is needed r-bioc-rtracklayer (1.50.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * No tab in license text (routine-update) r-bioc-rtracklayer (1.48.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rtracklayer (1.46.0-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-rtracklayer (1.46.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-rtracklayer (1.44.4-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.44.3-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor r-bioc-rtracklayer (1.44.2-1) unstable; urgency=medium . * New upstream version * Drop note about no testing in debian/tests/control_ * debhelper-compat 12 r-bioc-rtracklayer (1.44.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-bioc-rtracklayer (1.42.1-2) unstable; urgency=medium . * Team upload. * dh-update-R: Remove build-dep libgdal-dev and add r-bioc-zlibbioc. * Standards-Version: 4.3.0 r-bioc-rtracklayer (1.42.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rtracklayer (1.42.0-1) unstable; urgency=medium . * Team upload. * New upstream version Closes: #913527 * dh-update-R to update Build-Depends r-bioc-rtracklayer (1.40.6-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-rtracklayer (1.40.5-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.40.4-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.0 r-bioc-rtracklayer (1.40.3-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * New upstream version * dh-update-R to update Build-Depends r-bioc-rtracklayer (1.40.2-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.40.1-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.40.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-rtracklayer (1.40.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-rtracklayer (1.38.3-1) unstable; urgency=medium . * New upstream version * Preparation of data package moved from SVN to Git * Standards-Version: 4.1.3 * debhelper 11 r-bioc-rtracklayer (1.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.36.6-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-rtracklayer (1.36.4-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Testsuite: autopkgtest-pkg-r r-bioc-rtracklayer (1.36.4-1) unstable; urgency=medium . * New upstream version Closes: #871333 * Standards-Version: 4.0.1 (no changes needed) * Remove unused lintian override r-bioc-rtracklayer (1.34.1-1) unstable; urgency=medium . * New upstream version Closes: #846937 * debhelper 10 * d/watch: version=4 * Remove unused lintian override * New Build-Depends: pkg-config r-bioc-rtracklayer (1.34.0-2) unstable; urgency=medium . * Rebuild against libssl1.0.2 from unstable r-bioc-rtracklayer (1.34.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-rtracklayer (1.32.2-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.32.1-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.32.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * Add missing Build-Depends: libssl-dev * debian/copyright: Clarify license of files in src/ucsc/* Closes: #807580 r-bioc-rtracklayer (1.30.1-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.28.10-1) unstable; urgency=medium . * New upstream version * Adapt watch file * lintian-overrides for package-contains-timestamped-gzip r-bioc-rtracklayer (1.28.6-1) unstable; urgency=medium . * New upstream version r-bioc-rtracklayer (1.28.5-2) unstable; urgency=medium . * Upload to unstable instead of experimental r-bioc-rtracklayer (1.28.5-1) experimental; urgency=medium . * New upstream version r-bioc-rtracklayer (1.26.0-1) experimental; urgency=medium . * New upstream version + cme fix dpkg-control r-bioc-rtracklayer (1.24.2-1) unstable; urgency=medium . * New upstream version * Moved debian/upstream to debian/upstream/metadata * (Build-)Depends: r-bioc-genomicalignments * Drop autopkgtest that would need 800MB data package r-bioc-bsgenome.hsapiens.ucsc.hg19 to run successfully. Closes: #735543 r-bioc-rtracklayer (1.22.0-1) unstable; urgency=low . * Initial release (closes: #733283). r-bioc-scrnaseq (2.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-scrnaseq (2.14.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Set upstream metadata fields: Bug-Submit. r-bioc-scrnaseq (2.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-scrnaseq (2.10.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-scrnaseq (2.8.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-scrnaseq (2.6.1+ds-2) unstable; urgency=medium . * extra_depends=r-cran-testthat r-bioc-scrnaseq (2.6.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-scrnaseq (2.4.0+ds-3) unstable; urgency=high . * skip tests that require flaky downloads r-bioc-scrnaseq (2.4.0+ds-2) unstable; urgency=medium . * Source-only upload. * Drop debian/tests/control: it duplicates the pkg-r-autopkgtests r-bioc-scrnaseq (2.4.0+ds-1) unstable; urgency=medium . * Initial release (closes: #982082) r-bioc-shortread (1.60.0-2) unstable; urgency=medium . * Delete one test file also on armel r-bioc-shortread (1.60.0-1) unstable; urgency=medium . * New upstream version r-bioc-shortread (1.58.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-shortread (1.56.1-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-shortread (1.54.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-shortread (1.52.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-shortread (1.50.0-1) unstable; urgency=medium . [ Steffen Moeller ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * d/u/metadata: Completed references to registries * d/rules: Cleaning files auto-generated during build . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-shortread (1.48.0-2) unstable; urgency=medium . * Exclude failing test on non-Intel architectures Closes: #980082 r-bioc-shortread (1.48.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-shortread (1.46.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-shortread (1.44.3-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 r-bioc-shortread (1.44.1-1) unstable; urgency=medium . * New upstream version r-bioc-shortread (1.44.0-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-shortread (1.42.0-1) unstable; urgency=medium . [ Dylan Aïssi ] * Remove patch and use r-bioc-zlibbioc. . [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-bioc-shortread (1.40.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-shortread (1.38.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-shortread (1.38.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-shortread (1.36.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.3 * debhelper 11 r-bioc-shortread (1.36.0-1) unstable; urgency=medium . * New upstream version r-bioc-shortread (1.34.2-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-shortread (1.34.1-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Add debian/README.source to document binary data files r-bioc-shortread (1.34.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * Standards-Version: 4.1.0 (no changes needed) * Drop unused lintian overrides r-bioc-shortread (1.34.0-1) unstable; urgency=medium . * Team upload * New upstream version * Add Build-Depends: r-bioc-rsamtools (>= 1.28.0) r-bioc-shortread (1.32.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-shortread (1.30.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-shortread (1.28.0-1) unstable; urgency=medium . * New upstream version * Ignore false positive lintian warnings r-bioc-shortread (1.26.0-1) unstable; urgency=medium . * New upstream version Closes: #789985 r-bioc-shortread (1.24.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * adapt testsuite r-bioc-shortread (1.22.0-1) unstable; urgency=medium . * New upstream version * Moved debian/upstream to debian/upstream/metadata * Add autopkgtest * (Build-)Depends: r-bioc-genomicalignments Closes: #753224 r-bioc-shortread (1.20.0-1) unstable; urgency=low . * Initial release (closes: #731085) r-bioc-structuralvariantannotation (1.18.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-structuralvariantannotation (1.16.0+ds-1) unstable; urgency=medium . * Team upload. * Rebuild against latest r-base Closes: #1025045 * Standards-Version: 4.6.2 (routine-update) r-bioc-structuralvariantannotation (1.13.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-structuralvariantannotation (1.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-structuralvariantannotation (1.10.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-structuralvariantannotation (1.10.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Allow failure of piuparts * Test-Depends: r-cran-tidyverse r-bioc-structuralvariantannotation (1.8.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Trim trailing whitespace. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Skip test requiring BSgenome.Hsapiens.UCSC.hg19 r-bioc-structuralvariantannotation (1.6.0+ds-1) unstable; urgency=medium . * Initial release (closes: #983893) r-bioc-tfbstools (1.40.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-tfbstools (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-tfbstools (1.36.0+dfsg-2) unstable; urgency=medium . * Disable reprotest * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-tfbstools (1.36.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-tfbstools (1.34.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-tfbstools (1.32.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-tfbstools (1.30.0+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-biobase, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-biostrings, r-bioc-bsgenome, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rtracklayer, r-bioc-xvector and r-cran-rsqlite. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-tfbstools (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-tfbstools (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tfbstools (1.24.0+dfsg-2) unstable; urgency=medium . * Team upload. * Add patch to fix autopkgtest. * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-tfbstools (1.24.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-tfbstools (1.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * rename debian/tests/control.autodep8 to debian/tests/control * Remove test requiring not yet packaged JASPAR2016 r-bioc-tfbstools (1.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-tfbstools (1.18.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #900417) r-bioc-titancna (1.40.0-1) unstable; urgency=medium . * New upstream version r-bioc-titancna (1.38.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-titancna (1.36.0-1) unstable; urgency=medium . * New upstream version r-bioc-titancna (1.34.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-titancna (1.32.0-1) unstable; urgency=medium . * Allow failure of piuparts * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-titancna (1.30.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-biocgenerics, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-iranges, r-bioc-variantannotation, r-cran-data.table and r-cran-foreach. r-bioc-titancna (1.28.0-2) unstable; urgency=medium . [ Steffen Möller ] * Add new file - refs to registries . [ Andreas Tille ] * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-titancna (1.28.0-1) unstable; urgency=medium . * Initial release (closes: #975352) r-bioc-tximeta (1.20.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tximeta (1.20.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tximeta (1.20.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Set upstream metadata fields: Archive. r-bioc-tximeta (1.18.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. r-bioc-tximeta (1.18.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tximeta (1.16.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-tximeta (1.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-tximeta (1.14.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Reorder sequence of d/control fields by cme (routine-update) r-bioc-tximeta (1.14.0+dfsg-2) unstable; urgency=medium . * Team upload. * Skip test which needs a non-existing file r-bioc-tximeta (1.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.14.0+dfsg * Bump Standards-Version to 4.6.1 (no changes needed) r-bioc-tximeta (1.12.4+dfsg-2) unstable; urgency=medium . * Team upload. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-tximeta (1.12.4+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tximeta (1.12.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-tximeta (1.10.0+dfsg-2) unstable; urgency=medium . * Team upload. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-tximeta (1.10.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #994680) r-bioc-variantannotation (1.48.1-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.46.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-variantannotation (1.44.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-variantannotation (1.44.0-1) unstable; urgency=medium . * Team Upload. * New upstream version 1.44.0 * Update versioned B-D r-bioc-variantannotation (1.42.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-variantannotation (1.40.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-variantannotation (1.38.0-1) unstable; urgency=medium . [ Andreas Tille ] * Team Upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-annotationdbi, r-bioc-biostrings, r-bioc-bsgenome, r-bioc-genomeinfodb, r-bioc-genomicfeatures, r-bioc-genomicranges, r-bioc-iranges, r-bioc-rsamtools, r-bioc-rtracklayer, r-bioc-s4vectors, r-bioc-summarizedexperiment and r-bioc-xvector. . [ Nilesh Patra ] * d/control: Versioned B-D as per DESCRIPTION file r-bioc-variantannotation (1.36.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * No tab in license text (routine-update) r-bioc-variantannotation (1.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-variantannotation (1.32.0-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * debian/copyright: Use spaces rather than tabs in continuation lines. * Remove obsolete fields Name, Contact from debian/upstream/metadata. * Build-Depends: libcurl4-openssl-dev | libcurl4-dev r-bioc-variantannotation (1.30.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.0 r-bioc-variantannotation (1.28.10-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-variantannotation (1.28.8-1) unstable; urgency=medium . * New upstream version * debhelper 12 * rename debian/tests/control.autodep8 to debian/tests/control r-bioc-variantannotation (1.28.7-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-variantannotation (1.28.5-1) unstable; urgency=medium . * Team upload. * New upstream version. * Drop use_debian_packaged_zlib.patch, r-bioc-zlibbioc is now packaged. * Standards-Version: 4.3.0. r-bioc-variantannotation (1.28.3-1) unstable; urgency=medium . * Team upload. * New upstream version * Add Testsuite: autopkgtest-pkg-r * Add debian/upstream/metadata. r-bioc-variantannotation (1.28.2-1) unstable; urgency=medium . * Team upload. * New upstream version * Remove trailing whitespace in debian/copyright r-bioc-variantannotation (1.28.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-variantannotation (1.26.1-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.26.0-3) unstable; urgency=medium . * Rebuild for R 3.5 transition * dh-update-R to update Build-Depends r-bioc-variantannotation (1.26.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-variantannotation (1.26.0-1) unstable; urgency=medium . * New upstream version Closes: #897540 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-variantannotation (1.24.5-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.3 * debhelper 11 r-bioc-variantannotation (1.24.2-1) unstable; urgency=medium . * New upstream version Closes: #882362 * install run-unit-test script in /usr/share/doc/r-bioc-variantannotation r-bioc-variantannotation (1.24.1-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-variantannotation (1.22.3-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-variantannotation (1.22.1-1) unstable; urgency=medium . * Team upload * New upstream version * Update Build-Depends: r-bioc-genomicfeatures (>= 1.27.4), r-bioc-summarizedexperiment (>= 1.5.3), r-bioc-rsamtools (>= 1.28.0) * Refresh debian/patches/use_debian_packaged_zlib.patch r-bioc-variantannotation (1.20.2-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.20.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-variantannotation (1.20.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-variantannotation (1.18.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-variantannotation (1.16.3-1) unstable; urgency=medium . * New upstream version Closes: #804223 r-bioc-variantannotation (1.14.13-1) unstable; urgency=medium . * New upstream version * Fixed watch file r-bioc-variantannotation (1.14.6-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.14.4-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.12.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * Adapted dependencies r-bioc-variantannotation (1.10.5-1) unstable; urgency=medium . * New upstream version r-bioc-variantannotation (1.10.1-1) unstable; urgency=medium . * Initial release (closes: #755884) r-cran-alakazam (1.3.0-1) unstable; urgency=medium . * Team upload. * Disable reprotest * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-cran-alakazam (1.2.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Set upstream metadata fields: Archive, Bug-Database, Repository. r-cran-alakazam (1.2.0-1) unstable; urgency=medium . * Team Upload. * New upstream version 1.2.0 * d/control: Run cme r-cran-alakazam (1.1.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.1 (routine-update) r-cran-alakazam (1.0.2-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-cran-alakazam (1.0.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-cran-alakazam (1.0.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 12 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Update d/copyright r-cran-alakazam (0.3.0-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-cran-alakazam (0.2.11-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Section: gnu-r * Document binary data in README.source (removed lintian-override) r-cran-alakazam (0.2.10-1) unstable; urgency=medium . * Initial release (closes: #901668). r-cran-shazam (1.2.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-cran-shazam (1.1.2-1) unstable; urgency=medium . * Team upload. * New upstream version * Set upstream metadata fields: Repository. r-cran-shazam (1.1.1-1) unstable; urgency=medium . * Team upload. * New upstream version 1.1.1 * Bump Standards-Version to 4.6.1 (no changes needed) * Add Versioned B-D and dep in acc with dh-update-R r-cran-shazam (1.1.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) r-cran-shazam (1.0.2-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-cran-shazam (1.0.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-cran-shazam (0.2.3-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) r-cran-shazam (0.2.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.4.1 * Trim trailing whitespace. * Set upstream metadata fields: Archive, Bug-Database. r-cran-shazam (0.2.1-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 r-cran-shazam (0.1.11-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/copyright * Remove additional autopkgtest since upstream does not provide test files any more r-cran-shazam (0.1.10-1) unstable; urgency=medium . * Team upload. * New upstream version r-cran-shazam (0.1.9-2) unstable; urgency=medium . * Team upload. * Fixing Dependencies by running dh-update-R Closes: #908246 * Standards-Version: 4.2.1 * Section: gnu-r * Lintian override for false positive * Rewording to avoid wrong lintian suspicion r-cran-shazam (0.1.9-1) unstable; urgency=medium . * Initial release (closes: #901684). r-cran-spp (1.16.0-2) unstable; urgency=medium . * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Archive. r-cran-spp (1.16.0-1) unstable; urgency=medium . [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.3.0 . [ Dylan Aïssi ] * Standards-Version: 4.4.0 r-cran-spp (1.15.5-1) unstable; urgency=medium . * Team upload. * New upstream version * Rename package to r-cran-spp, because now on CRAN (Closes: #910351). r-cran-tigger (1.1.0-1) unstable; urgency=medium . * Team upload. * Disable reprotest * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-cran-tigger (1.0.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * debhelper-compat 13 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Set upstream metadata fields: Repository. r-cran-tigger (1.0.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Archive, Bug-Database. r-cran-tigger (0.4.0-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/copyright r-cran-tigger (0.3.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-cran-tigger (0.3.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Section: gnu-r * Add README.source to explain binary files r-cran-tigger (0.2.11-1) unstable; urgency=medium . * Initial release (closes: #901673.) rasqal (0.9.33-2.1) unstable; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. Closes: #1062771 rasqal (0.9.33-2.1~exp1) experimental; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. ruby-ethon (0.16.0-2) unstable; urgency=medium . * Don't hardcode a dependency on libcurl4 (Closes: #1068537) tzdata (2024a-3) unstable; urgency=medium . * Avoid timezones being symlinks to symlinks to avoid breaking C++20 standard expectation (LP: #2062522) tzdata (2024a-2) unstable; urgency=medium . * Update Italian debconf translation. Thanks to Ceppo (Closes: #1063490) * Replace America/Godthab by America/Nuuk * Do not replace CET, CST6CDT, EET, EST*, HST, MET, MST*, PST8PDT, WET. The replacements differed in using daylight saving. (LP: #2055718) * Fix updating US/Indiana-Starke to America/Indiana/Knox * Allow ziguard.awk to generate timezone symlink that point to symlinks to fix (at least) the timezone symlinks Africa/Asmera, Antarctica/South_Pole, Iceland, Pacific/Ponape, and Pacific/Truk. * test_timezone_conversions: Check symlink targets