qcborspectrumprecursor.h

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/**
 * \file pappsomspp/core/processing/cbor/mzcbor/copyreplace/qcborspectrumprecursor.h
 * \date 2/10/2026
 * \author Olivier Langella
 * \brief Low level CBOR map to store an mzCBOR Spectrum object
 *  */
 
/*******************************************************************************
 * Copyright (c) 2026 Olivier Langella <Olivier.Langella@cnrs.fr>.
 *
 * This file is part of PAPPSOms-tools.
 *
 *     PAPPSOms-tools is free software: you can redistribute it and/or modify
 *     it under the terms of the GNU General Public License as published by
 *     the Free Software Foundation, either version 3 of the License, or
 *     (at your option) any later version.
 *
 *     PAPPSOms-tools is distributed in the hope that it will be useful,
 *     but WITHOUT ANY WARRANTY; without even the implied warranty of
 *     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *     GNU General Public License for more details.
 *
 *     You should have received a copy of the GNU General Public License
 *     along with PAPPSOms-tools.  If not, see <http://www.gnu.org/licenses/>.
 *
 ******************************************************************************/
 
 
#pragma once
#include <QString>
#include <QCborMap>
#include <QDebug>
#include <qcbormap.h>
#include "pappsomspp/export-import-config.h"
#include "pappsomspp/core/processing/cbor/mzcbor/precursor.h"
 
namespace pappso
{
namespace cbor
{
namespace mzcbor
{
/**
 * @todo write docs
 */
class PMSPP_LIB_DECL QcborSpectrumPrecursor : public QCborMap
{
  public:
  QcborSpectrumPrecursor(const QCborMap &cbor_map);
  QcborSpectrumPrecursor(const QcborSpectrumPrecursor &other);
 
  QString getSpectrumRef() const;
 
  void setSpectrumRef(const QString &spectrum_ref);
 
  std::vector<SelectedIon> getSelectedIonList() const;
  IsolationWindow getIsolationWindow() const;
  void setSelectedIon(double mz, double intensity, int charge);
  // void decodeTrace(pappso::Trace &trace) const;
};
} // namespace mzcbor
} // namespace cbor
} // namespace pappso